BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035H02SP1|AL430123
(697 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig319 870 0.0
>3x_Contig319
Length = 1317
Score = 870 bits (438), Expect = 0.0
Identities = 483/490 (98%), Gaps = 6/490 (1%)
Strand = Plus / Plus
Query: 1 gatcgatagcgtcgatttccgtttgaaacgcctgctttagctgtgatatttcgtaatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 gatcgatagcgtcgatttccgtttgaaacgcctgctttagctgtgatatttcgtaatcat 892
Query: 61 aattcttaattgtgccattggccaaatcattctcaacctgctcctcggctgcccgtag-t 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 893 aattcttaattgtgccattggccaaatcattctcaacctgctcctcggctgcccgtaggt 952
Query: 120 caggaaccacttcatctgtgtattgcctctgcaataattgtagtgtttccgaattttcga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 caggaaccacttcatctgtgtattgcctctgcaataattgtagtgtttccgaattttcga 1012
Query: 180 tttgttttgcctttgttatctccttctaactgatgtaattttttcttttgattgtcaagc 239
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 tttgttttgcctttgtt-tctccttctaactgatgtaattttttcttttgattgtcaagc 1071
Query: 240 tgagactgaagaatcttcatcttcaccataactccggaagatagtatattgtttagtttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 tgagactgaagaatcttcatcttcaccataactccggaagatagtatattgtttagtttt 1131
Query: 300 tgatctgtttgcaagagctgttcacgacatatacgatgagatttgcttccctcaaatgag 359
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 1132 tgatctgtttgcaagagctgttcacg-catat-cgatgagatttgcttccctcaaatgag 1189
Query: 360 attctatgcaagtctagtcgatattaactgtagaacatcgtacaattcatgtgtcaaggt 419
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 attct-tgcaagtct-gtcgatattaactgtagaacatcgtacaattcatgtgtcaaggt 1247
Query: 420 ctggaaagtattcatagatattcgaagctttctatgtttctgttccaaattattcaaatt 479
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1248 ctggaaagtattcatagatattcgaagctttctatgtttctgttccaaattaatcaaatt 1307
Query: 480 cgtttgctga 489
||||||||||
Sbjct: 1308 cgtttgctga 1317
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6461
Number of Sequences: 1807
Number of extensions: 6461
Number of successful extensions: 168
Number of sequences better than 1.0e-20: 1
length of query: 697
length of database: 10,358,551
effective HSP length: 16
effective length of query: 681
effective length of database: 10,329,639
effective search space: 7034484159
effective search space used: 7034484159
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)